Search results for "Ecology and Environmental Sciences"

showing 10 items of 88 documents

Land Use Affects Carbon Sources to the Pelagic Food Web in a Small Boreal Lake

2016

Small humic forest lakes often have high contributions of methane-derived carbon in their food webs but little is known about the temporal stability of this carbon pathway and how it responds to environmental changes on longer time scales. We reconstructed past variations in the contribution of methanogenic carbon in the pelagic food web of a small boreal lake in Finland by analyzing the stable carbon isotopic composition (δ13C values) of chitinous fossils of planktivorous invertebrates in sediments from the lake. The δ13C values of zooplankton remains show several marked shifts (approx. 10 ‰), consistent with changes in the proportional contribution of carbon from methane-oxidizing bacteri…

010504 meteorology & atmospheric sciencesDrainage basinMarine and Aquatic SciencesSocial Scienceslcsh:MedicinePlant SciencemaankäyttöForests580 Plants (Botany)01 natural sciences540 Chemistrylcsh:ScienceFinlandSedimentary GeologyMultidisciplinarygeography.geographical_feature_categoryGeographyEcologyδ13CEcologyPlant AnatomyGeologyAgricultureGeneral MedicinePlantsPlanktonTerrestrial EnvironmentsFood webpelagic food webPollenGeneral Agricultural and Biological SciencesResearch ArticleFreshwater Environments010506 paleontologyFood ChainAlgaeta1172chemistry.chemical_elementcarbon sourcesHuman GeographyZooplanktonZooplanktonEcosystemsGeneral Biochemistry Genetics and Molecular BiologyCarbon cycleAnimalsHumansPetrology0105 earth and related environmental sciencesgeographyEcology and Environmental Scienceslcsh:ROrganismsAquatic EnvironmentsBiology and Life Sciencesland usePelagic zoneBodies of Water15. Life on landInvertebratesCarbonLakesDaphniachemistryBoreal13. Climate actionPhytoplanktonEarth Sciences570 Life sciences; biologyta1181Sedimentlcsh:Qsmall boreal lakesCarbonPLoS ONE
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Steroid Biomarkers Revisited - Improved Source Identification of Faecal Remains in Archaeological Soil Material.

2017

Steroids are used as faecal markers in environmental and in archaeological studies, because they provide insights into ancient agricultural practices and the former presence of animals. Up to now, steroid analyses could only identify and distinguish between herbivore, pig, and human faecal matter and their residues in soils and sediments. We hypothesized that a finer differentiation between faeces of different livestock animals could be achieved when the analyses of several steroids is combined (Δ5-sterols, 5α-stanols, 5β-stanols, epi-5β-stanols, stanones, and bile acids). We therefore reviewed the existing literature on various faecal steroids from livestock and humans and analysed faeces …

010504 meteorology & atmospheric sciencesPhysiologySwineSocial Scienceslcsh:MedicinePlant ScienceBreeding01 natural sciencesFecesSoilchemistry.chemical_compoundChenodeoxycholic acidMedicine and Health SciencesBilelcsh:ScienceMammalsMultidisciplinaryEcologyOrganic CompoundsGoatsAgricultureRuminantsBreedBody FluidsTrophic InteractionsCoprostanolChemistrySterolsArchaeologyCommunity EcologyPhysical SciencesVertebratesSteroidsLivestockDonkeyAnatomyResearch Article010506 paleontologyLivestockEquinesBiologyGas Chromatography-Mass SpectrometryBile Acids and SaltsGoosePlant-Animal Interactionsbiology.animalAnimalsHumansHerbivoryHorsesFeces0105 earth and related environmental sciencesHerbivorebusiness.industryPlant EcologyOrganic ChemistryEcology and Environmental Scienceslcsh:RChemical CompoundsOrganismsBiology and Life SciencesArchaeologychemistryAmnioteslcsh:QbusinessBiomarkersPLoS ONE
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Soil features in rookeries of Antarctic penguins reveal sea to land biotransport of chemical pollutants

2017

© The Author(s).

010504 meteorology & atmospheric scienceslcsh:MedicineSoil Chemistry010501 environmental sciences01 natural sciencesGeographical LocationsSoilOrganic Chemicalslcsh:ScienceSoil MicrobiologyTotal organic carbonRookeryMultidisciplinaryEcologySoil chemistryGenomicsSeabirdsChemistryMedical MicrobiologyVertebratesPhysical SciencesEnvironmental PollutantsSeasonsSoil microbiologyResearch ArticleChemical ElementsPollutantsDeceptionOceans and SeasSoil ScienceAntarctic RegionsMicrobial GenomicsPenguinsMicrobiologyBirdsGeneticsAnimalsEnvironmental ChemistryDominance (ecology)0105 earth and related environmental sciencesPollutantShetlandBehaviorBacterialcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesSpheniscidaeAmniotesPeople and PlacesSoil waterAntarcticaMetagenomeEnvironmental sciencelcsh:QMicrobiomeMetagenomics
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Ocean acidification at a coastal CO2 vent induces expression of stress-related transcripts and transposable elements in the sea anemone Anemonia viri…

2019

Published version, available at: https://doi.org/10.1371/journal.pone.0210358 Ocean acidification threatens to disrupt interactions between organisms throughout marine ecosystems. The diversity of reef-building organisms decreases as seawater CO2 increases along natural gradients, yet soft-bodied animals, such as sea anemones, are often resilient. We sequenced the polyA-enriched transcriptome of adult sea anemone Anemonia viridis and its dinoflagellate symbiont sampled along a natural CO2 gradient in Italy to assess stress levels in these organisms. We found that about 1.4% of the anemone transcripts, but only ~0.5% of the Symbiodinium sp. transcripts were differentially expressed. Processe…

0106 biological sciences0301 basic medicineAtmospheric ScienceMolecular biologyMarine and Aquatic SciencesGene ExpressionRetrotransposonSea anemone01 natural sciencesAnemoniaSequencing techniquesMobile Genetic ElementsMultidisciplinarybiologyQREukaryotaOcean acidificationAnemoneRNA sequencingGenomicsChemistryRetrotransposonsPhysical SciencesMedicineTranscriptome AnalysisResearch ArticleScienceZoology010603 evolutionary biology03 medical and health sciencesGreenhouse GasesCnidariaGenetic ElementsSea WaterGeneticsVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470Environmental ChemistryAnimalsMarine ecosystemBiology and life sciencesEcology and Environmental SciencesDinoflagellateChemical CompoundsOrganismsTransposable ElementsCorrectionAquatic EnvironmentsComputational BiologyCarbon Dioxidebiology.organism_classificationGenome AnalysisMarine EnvironmentsInvertebratesVDP::Mathematics and natural science: 400::Basic biosciences: 470Research and analysis methods:Genetikk og genomikk: 474 VDP::Marinbiologi:497 VDP::Økologi:488 [VDP]030104 developmental biologySea AnemonesMolecular biology techniquesAtmospheric ChemistryEarth SciencesSeawater
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Habitat Discontinuities Separate Genetically Divergent Populations of a Rocky Shore Marine Fish.

2016

Habitat fragmentation has been suggested to be responsible for major genetic differentiations in a range of marine organisms. In this study, we combined genetic data and environmental information to unravel the relative role of geography and habitat heterogeneity on patterns of genetic population structure of corkwing wrasse (Symphodus melops), a rocky shore species at the northern limit of its distribution range in Scandinavia. Our results revealed a major genetic break separating populations inhabiting the western and southern coasts of Norway. This genetic break coincides with the longest stretch of sand in the whole study area, suggesting habitat fragmentation as a major driver of genet…

0106 biological sciences0301 basic medicineHeredityRange (biology)Population geneticslcsh:Medicine01 natural sciencesRocky shoreGene FrequencyEnvironmental GeographyEthnicitieslcsh:Scienceeducation.field_of_studyMultidisciplinaryHabitat fragmentationbiologyGeographyEcologyNorwayFishesHabitatsPhylogeographyHabitatBiogeographyResearch ArticleGene FlowNorwegian PeoplePopulation010603 evolutionary biology03 medical and health sciencesparasitic diseasesGeneticsAnimalseducationAllelesEcosystemEvolutionary BiologyPopulation BiologyEcology and Environmental Sciencesfungilcsh:RBiology and Life SciencesGenetic VariationPelagic zoneBayes TheoremDNASequence Analysis DNAbiology.organism_classification030104 developmental biologyGenetics PopulationGenetic LociPeople and PlacesEarth SciencesGenetic PolymorphismPopulation Groupingslcsh:QCorkwing wrassePopulation GeneticsMicrosatellite RepeatsPLoS ONE
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Long-Distance Travellers: Phylogeography of a Generalist Parasite, Pholeter gastrophilus, from Cetaceans

2017

We studied the phylogeography and historical demography of the most generalist digenean from cetaceans, Pholeter gastrophilus, exploring the effects of isolation by distance, ecological barriers and hosts' dispersal ability on the population structure of this parasite. The ITS2 rDNA, and the mitochondrial COI and ND1 from 68 individual parasites were analysed. Worms were collected from seven oceanic and coastal cetacean species from the south western Atlantic (SWA), central eastern Atlantic, north eastern Atlantic (NEA), and Mediterranean Sea. Pholeter gastrophilus was considered a single lineage because reciprocal monophyly was not detected in the ML cladogram of all individuals, and seque…

0106 biological sciences0301 basic medicineHeredityTroglotrematidaePopulation Dynamicslcsh:MedicinePopulation geneticsMarine and Aquatic SciencesPathogenesisGeneralist and specialist speciesPathology and Laboratory Medicine01 natural sciencesMonophylyDatabase and Informatics MethodsOceansMedicine and Health Scienceslcsh:ScienceAtlantic OceanMammalseducation.field_of_studyLikelihood FunctionsMultidisciplinaryGeographyReproductive isolationDNA HelminthPhylogeographyGenetic MappingBiogeographyVertebratesHost-Pathogen InteractionsSequence AnalysisResearch ArticleReproductive IsolationBioinformaticsGenetic SpeciationDolphinsPopulationZoologyMarine BiologyBiologyResearch and Analysis Methods010603 evolutionary biology03 medical and health sciencesBodies of waterGeneticsMediterranean SeaAnimalseducationMarine MammalsIsolation by distanceDemographyEvolutionary BiologyAnalysis of VariancePopulation BiologyPilot Whaleslcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesGenetic VariationSequence Analysis DNAPhylogeography030104 developmental biologyHaplotypesAmniotesEarth SciencesBiological dispersallcsh:QCetaceaPopulation GeneticsPLoS ONE
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Arbuscular mycorrhizal symbiosis mitigates the negative effects of salinity on durum wheat

2017

Arbuscular mycorrhizal (AM) symbiosis is generally considered to be effective in ameliorating the plant tolerance to salt stress. Unfortunately, the comprehension of the mechanisms implicated in salinity stress alleviation by AM symbiosis is far from being complete. Thus, an experiment was performed by growing durum wheat (Triticum durum Desf.) plants under salt-stress conditions to evaluate the influence of AM symbiosis on both the plant growth and the regulation of a number of genes related to salt stress and nutrient uptake. Durum wheat plants were grown outdoors in pots in absence or in presence of salt stress and with or without AM fungi inoculation. The inoculum consisted of a mixture…

0106 biological sciences0301 basic medicineRhizophagus irregularisSalinityLeavesGene Expressionlcsh:MedicinePlant SciencePlant RootsPolymerase Chain ReactionPhysical Chemistry01 natural sciencesNutrientMycorrhizaePlant Resistance to Abiotic Stresslcsh:ScienceTriticumBiomass (ecology)MultidisciplinaryEcologyPlant Anatomyfood and beveragesSalt TolerancePlantsSettore AGR/02 - Agronomia E Coltivazioni ErbaceeChemistryPlant PhysiologyPhysical SciencesWheatSymbiosiResearch ArticleBiology03 medical and health sciencesSymbiosisSettore AGR/07 - Genetica AgrariaPlant-Environment InteractionsBotanyGeneticsPlant DefensesGene RegulationGrassesSymbiosisBiochemistry Genetics and Molecular Biology (all)InoculationGene Expression ProfilingPlant EcologyEcology and Environmental Scienceslcsh:RfungiOrganismsFungiBiology and Life SciencesPlant RootPlant Pathologybiology.organism_classificationSporeSalinitySpecies Interactions030104 developmental biologyAgricultural and Biological Sciences (all)Chemical PropertiesArbuscular mycorrhizal symbiosislcsh:QSalt-Tolerance010606 plant biology & botanyPLOS ONE
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Topological congruence between phylogenies of Anacanthorus spp. (Monogenea: Dactylogyridae) and their Characiformes (Actinopterygii) hosts: A case of…

2017

Cophylogenetic studies aim at testing specific hypotheses to understand the nature of coevolving associations between sets of organisms, such as host and parasites. Monogeneans and their hosts provide and interesting platform for these studies due to their high host specificity. In this context, the objective of the present study was to establish whether the relationship between Anacanthorus spp. with their hosts from the upper Paraná River and its tributaries can be explained by means of cospeciation processes. Nine fish species and 14 monogenean species, most of them host specific, were studied. Partial DNA sequences of the genes RAG1, 16S and COI of the fish hosts and of the genes ITS2, …

0106 biological sciences0301 basic medicineSpeciationlcsh:MedicineAnimal PhylogeneticsCharaciformes01 natural sciencesDatabase and Informatics MethodsRNA Ribosomal 16Slcsh:ScienceDNA extractionPhylogenyData ManagementMultidisciplinaryGeographyPhylogenetic treebiologyEukaryotaPhylogenetic AnalysisPhylogeneticsFreshwater FishPhylogeographyBiogeographyVertebratesCharaciformesSequence AnalysisMonogeneaResearch ArticleComputer and Information SciencesEvolutionary ProcessesBioinformaticsContext (language use)Topology010603 evolutionary biologyHost-Parasite InteractionsElectron Transport Complex IV03 medical and health sciencesExtraction techniquesPhylogeneticsGeneticsAnimalsEvolutionary SystematicsParasite EvolutionTaxonomyHomeodomain ProteinsEvolutionary BiologyPopulation BiologyHost (biology)lcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNASequence Analysis DNAbiology.organism_classificationDactylogyridaeResearch and analysis methodsPhylogeographyFish030104 developmental biologyPlatyhelminthsEarth Scienceslcsh:QParasitologyZoologySequence AlignmentPopulation GeneticsPLOS ONE
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Widespread plant specialization in the polyphagous planthopper Hyalesthes obsoletus (Cixiidae), a major vector of stolbur phytoplasma: Evidence of cr…

2018

The stolbur phytoplasma vector Hyalesthes obsoletus is generally considered as a polyphagous species associated with numerous wild and cultivated plants. However, recent research in southeastern Europe, the distribution centre of H. obsoletus and the area of most stolbur-inflicted crop diseases, points toward specific host-plant associations of the vector, indicating specific vector-based transmission routes. Here, we study the specificity of populations associated with four host-plants using mitochondrial and nuclear genetic markers, and we evaluate the evolution of host-shifts in H. obsoletus. Host-plant use was confirmed for Convolvulus arvensis, Urtica dioica, Vitex agnus-castus and Cre…

0106 biological sciences0301 basic medicineSympatryHereditySpeciationlcsh:MedicineDisease Vectors01 natural sciencesBiochemistryGeographical LocationsHyalestheslcsh:SciencePhylogenyEnergy-Producing OrganellesMultidisciplinarybiologyGeographyEcologyCixiidaeMitochondrial DNAMitochondriaEuropeNucleic acidsSympatryGenetic MappingPhylogeographyBiogeographySympatric speciationHost-Pathogen InteractionsCellular Structures and OrganellesResearch ArticleGenetic MarkersSpecies complexPhytoplasmaEvolutionary ProcessesEcological MetricsForms of DNAZoologyBioenergetics010603 evolutionary biologyHemiptera03 medical and health sciencesPlanthopperGenetic variationCryptic SpeciationGeneticsAnimalsPlant DiseasesEvolutionary BiologyPopulation Biologylcsh:REcology and Environmental SciencesBiology and Life SciencesSpecies DiversityDNACell Biology15. Life on landbiology.organism_classificationInsect Vectors030104 developmental biologyHaplotypesGenetic markerGenome MitochondrialPeople and PlacesEarth Scienceslcsh:QPopulation Genetics
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Regional endothermy as a trigger for gigantism in some extinct macropredatory sharks

2017

Otodontids include some of the largest macropredatory sharks that ever lived, the most extreme case being Otodus (Megaselachus) megalodon. The reasons underlying their gigantism, distribution patterns and extinction have been classically linked with climatic factors and the evolution, radiation and migrations of cetaceans during the Paleogene. However, most of these previous proposals are based on the idea of otodontids as ectothermic sharks regardless of the ecological, energetic and body size constraints that this implies. Interestingly, a few recent studies have suggested the possible existence of endothermy in these sharks thus opening the door to a series of new interpretations. Accord…

0106 biological sciencesAtmospheric ScienceTeethPhysiologylcsh:MedicinePredationOxygen Isotopes01 natural sciencesBody TemperatureEndocrinologyMedicine and Health SciencesBody Sizelcsh:ScienceChondrichthyesClimatologyMultidisciplinaryEcologyMegalodonbiologyFossilsEcologyTemperatureEukaryotaOtodusBiological EvolutionTrophic InteractionsSwimming speedPhysiological ParametersCommunity EcologyEctothermVertebratesAnimal FinsAnatomyPaleotemperatureResearch Article010506 paleontologyEndocrine DisordersActive modePaleontologiaBody sizeExtinction BiologicalModels Biological010603 evolutionary biologyGigantismOxygen ConsumptionmedicineAnimalsPaleoclimatologySwimming0105 earth and related environmental sciencesExtinctionBiological Locomotionlcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesPaleontologymedicine.diseasebiology.organism_classificationGigantismFishJawSharksEarth Scienceslcsh:QToothDigestive SystemHeadElasmobranchiiPLOS ONE
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